BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029H03SP1|AL429122
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig934 1638 0.0
>3x_Contig934
Length = 4039
Score = 1638 bits (822), Expect = 0.0
Identities = 846/856 (98%), Gaps = 2/856 (0%)
Strand = Plus / Plus
Query: 1 gatcacccgctaatttctaagaaattgtaggtgcttgtmaaamamttattaataaaacga 60
|||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||
Sbjct: 2043 gatcacccgctaatttctaagaaattgtaggtgcttgtcaaacacttattaataaaacga 2102
Query: 61 atggaataatacctctctttatcagttctattgatttattgtgactgaaaacccttaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2103 atggaataatacctctctttatcagttctattgatttattgtgactgaaaacccttaagt 2162
Query: 121 ctgttttggttttaattgtacatatttcgattatactcatcttctcgaatgataactaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 ctgttttggttttaattgtacatatttcgattatactcatcttctcgaatgataactaga 2222
Query: 181 taaagaaaacgtacatatacacagagaaaagggsattgacgaagctttgcagcctttaaa 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2223 taaagaaaacgtacatatacacagagaaaagggcattgacgaagctttgcagcctttaaa 2282
Query: 241 agtctccaataacagagtattcattaatcataggtatgtgcgtgttctactcttgtctat 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2283 agtctccaataacagagtattcattaatcataggtatgtgcgtcttctactcttgtctat 2342
Query: 301 cctgtagctcatccttattccttctcgagcatgtattggcgtcttatttgaagaactcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 cctgtagctcatccttattccttctcgagcatgtattggcgtcttatttgaagaactcac 2402
Query: 361 gtgccgagaaagaaattatgttaccctgaaaatagatactggagaggaaaacatcaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2403 gtgccgagaaagaaattatgttaccctgaaaatagatactggagaggaaaacatcaaacc 2462
Query: 421 cgtgcatggtgataacagatgtgccatgcaaatttcctcgaga-ccttttggggacaata 479
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2463 cgtgcatggtgataacagatgtgccatgcaaatttcctcgagacccttttggggacaata 2522
Query: 480 gttcatgcatatacgavctgsatggacgttcttaataacaacgattatctgtaccattga 539
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2523 gttcatgcatatacgacctgcatggacgttcttaataacaacgattatctgtaccattga 2582
Query: 540 aatttgctcttctacattcaggtcttagtagttttcttttcggttaagagtgcaggttta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2583 aatttgctcttctacattcaggtcttagtagttttcttttcggttaagagtgcaggttta 2642
Query: 600 ctgaaaagtgaaa-catacaaagactcgtcgtcaagatgcaagtacagaatgttgatcgc 658
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2643 ctgaaaagtgaaaccatacaaagactcgtcgtcaagatgcaagtacagaatgttgatcgc 2702
Query: 659 tccaagttcgctccaatgaagaatgatttgatgctcagagcagctttaggtgagaaggtt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2703 tccaagttcgctccaatgaagaatgatttgatgctcagagcagctttaggtgagaaggtt 2762
Query: 719 gaaagaccaccatgttggattatgagamaggctggacgttatttaccagaataccatgag 778
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2763 gaaagaccaccatgttggattatgagacaggctggacgttatttaccagaataccatgag 2822
Query: 779 gtgaagaatggtcgtgactttttcgagacatgtcgtgatgcagaaattgcttcagaaatt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2823 gtgaagaatggtcgtgactttttcgagacatgtcgtgatgcagaaattgcttcagaaatt 2882
Query: 839 actattcagcccgtga 854
||||||||||||||||
Sbjct: 2883 actattcagcccgtga 2898
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5961
Number of Sequences: 1807
Number of extensions: 5961
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)